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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825368.1_cds_XP_016502298.1_15953
CDS Infomation

[gene=LOC107820521] [db_xref=GeneID:107820521] [protein=phospholipid--sterol O-acyltransferase-like] [protein_id=XP_016502298.1] [location=join(95696..95905,97816..97951,99870..100014,100824..100993,101091..101167,101484..101697,101775..101949,103503..103602,104619..104713,105202..105253,106075..106146,107012..107180,108329..108433,108510..108594,108677..108758)] [gbkey=CDS]
Sequence

ATGAGAGGAGGACACGTGTGCATCGTCGTCAGTTTCCTCCTCCTCCTAGCTGCCGTTAGC
GGGGAGTTCGCCGGCGATTACTCGAAGCTGTCGGGAATTATCATCCCGGGGTTTGCATCC
ACCCAACTAAGAGCATGGTCAATATTGGACTGCCCTTATTCTCCTCTGGATTTCAATCCT
CTCGATTTAGTCTGGCTCGACACCACCAAACTTCTTTCTGCTGTGAATTGCTGGCTGAAG
TGTATGATGTTGGATCCTTACAATCAAACAGATCATCGGGAATGCAAGTCTCGACCTGAC
AGTGGCCTTTCTGCTATCACAGAGCTTGATCCGGGATACATTACAGGTCCTCTGTCATCA
GTGTGGAAAGAATGGGTTAAGTGGTGCATTGAATTTGGTATCGAGGCTAATGCAATCATC
GCAGTTCCATATGACTGGAGATTGTCTCCATCAAAGCTTGAGGAGCGAGATCTTTACTTT
CACAAACTAAAGCTAACTTTTGAAACTGCTCTTAAACTTCGTGGTGGGCCTTCAATAGTT
TTCGCTCATTCATTAGGTAACAATGTCTTTAGATACTTCTTGGAGTGGTTGAAATTAGAG
ATTGCTCCGAAAGAGTATATGCGATGGCTAGACGATCACATTCATGCCTATTTTGCTGTT
GGAGCTCCTCTTCTTGGTGCTATTGAGACAGTCAAAGCAACATTATCGGGGGCTACATTT
GGTCTTCCTGTTTCTGAGGGGACAGCTCGCCTGATGTTCAATACTTTTGGATCTTCTATG
TGGATGTTGCCATTTTCAAAATATTGTACAACAGATAATGTGTACCGGAGGCATTTCTCT
GGCGGAAACCGGGAAAACCATCACGCCTACCATTGCGATGAGCATGAGCTTCAATCAAAC
TATTCTGGCTGGCCAACAAACATAATCAATATTGAAGTTCCTTCAATTCGAGGGGATGAG
GCTTATCCATCATTTGTAGAAATTGCCCAAGCTAACTTGTCGGGAATGGAATGTGGATTT
CCGACGCAATTGTCCTTTTCTGCTCGTGAAGTCTCTGATGGGACCTTTTTCAAAGCCATA
AAGGATTATGATCCTGATAGCGAAAGGCTCTTGCACCTTTTACAAAAGTCTTACCATGAT
GATCCGATTTTAAATCCTCTAACACCTTGGGAAAGACCACCTCTCAAGAACATATTCTGC
ATTTATGGCATAGATTCGAAGACTGAGGTTGGTTACTATTTTGCACCCAGTGGGAAGCCT
TATCCTGATAATTGGATTATAACAGATGTGATATATGAAATTGAAGGATCTCTGTATTCA
CGGTCAGGAAATCTGGTTGAAGGAAACCCAGGTGCAACAAGTGGGGATGAGACGGTGCCA
TACCATTCACTCTCCTGGTGCAAGAATTGGCTGGGGCCAAAAGTGAACATAACAAGGACA
CCACAGTCAGAGCATGATGGCTCAGATGTACAAGTGCATCGAAATATAGAGCATCAACAT
GGCGAAGATATCATCCCCAATATGACAAGGTTACCTACGGTGAAGTACATAACCTATTAT
GAGGATTCTGAAAGTTTTCCAGGAAAGAGAACAGCAGTTTGGGAGCTCGATAAAGCAAAT
CACAGGAACATTGTCAGATCTCCAGTTTTGATGCGGGAGCTGTGGCTTGAGATGTGGCAT
GATATTCATCCTGATAAAAAGTCTAACTTTGTTACTAAAGCAAAGCGTGGGCCTCTGAGG
GATGAGGACTGCTATTGGGATTATGGGAAAGCCCGATGCGCATGGCCTGAACATTGTGAA
TACAGATATTTATTCGGGGATGTTCACCTGGGGCAGAGTTGCAGATTGAAGAATTCTACA
TATGATCTCCTGTCGCACTATGTATGA

Peptide Sequence

PEP ID

XP_016502298.1
PEP Infomation

PREDICTED: phospholipid--sterol O-acyltransferase-like [Nicotiana tabacum]
Sequence

MRGGHVCIVVSFLLLLAAVSGEFAGDYSKLSGIIIPGFASTQLRAWSILDCPYSPLDFNP
LDLVWLDTTKLLSAVNCWLKCMMLDPYNQTDHRECKSRPDSGLSAITELDPGYITGPLSS
VWKEWVKWCIEFGIEANAIIAVPYDWRLSPSKLEERDLYFHKLKLTFETALKLRGGPSIV
FAHSLGNNVFRYFLEWLKLEIAPKEYMRWLDDHIHAYFAVGAPLLGAIETVKATLSGATF
GLPVSEGTARLMFNTFGSSMWMLPFSKYCTTDNVYRRHFSGGNRENHHAYHCDEHELQSN
YSGWPTNIINIEVPSIRGDEAYPSFVEIAQANLSGMECGFPTQLSFSAREVSDGTFFKAI
KDYDPDSERLLHLLQKSYHDDPILNPLTPWERPPLKNIFCIYGIDSKTEVGYYFAPSGKP
YPDNWIITDVIYEIEGSLYSRSGNLVEGNPGATSGDETVPYHSLSWCKNWLGPKVNITRT
PQSEHDGSDVQVHRNIEHQHGEDIIPNMTRLPTVKYITYYEDSESFPGKRTAVWELDKAN
HRNIVRSPVLMRELWLEMWHDIHPDKKSNFVTKAKRGPLRDEDCYWDYGKARCAWPEHCE
YRYLFGDVHLGQSCRLKNSTYDLLSHYV

Transcript Sequence

Gene sequence data has not been registered.